Access automatic trees

Overview

CZ GEN EPI automatically generates an Overview tree that provides a broad overview of SARS-CoV-2 diversity. See the guide describing phylogenetic tree types for details regarding automatically generated trees. Here we describe how to access automatic tree builds on your account.

After reading this user guide, you will be able to: 

• Access automatic trees

Accessing automatic trees

To access trees that are automatically generated by CZ GEN EPI:

1. Login in to your account and go to the Phylogenetic Tree page.
   
   CZ GEN EPI account page highlighting the Phylogenetic Trees tab
2. Look for the latest automatic build.
   
   Example Phylogenetic Tree page showing the latest automatic tree build. 
3. Click on the ‘View tree in Nextstrain’ icon to explore the interactive tree. See ‘View trees in Nextstrain’ for details on how to visualize trees.